Licensing

The CRAVAT web service is free for public use.

If you use CHASM or SNVBox in your work, please cite the following papers:

• Douville C, Carter H, Kim R, Niknafs N, Diekhans M, Stenson PD, Cooper DN, Ryan M, Karchin R (2013) CRAVAT: cancer-related analysis of variants toolkit. Bioinformatics 29(5):647-8. doi: 10.1093/bioinformatics/btt017. Epub 2013 Jan 16. PMID: 23325621
• Wong WC, Kim D, Carter H, Diekhans M, Ryan M and Karchin R (2011) CHASM and SNVBox: toolkit for detecting biologically important single nucleotide mutations in cancer. Bioinformatics. 27(15):2147-8. PMID: 21685053
• Carter H, Chen S, Isik L, Tyekucheva S, Velculescu VE, Kinzler KW, Vogelstein B, Karchin R (2009) Cancer-specific high-throughput annotation of somatic mutations. Cancer Research. 69(16):6660-7. PMID: 19654296